Prediction of Protein-RNA Binding Energy Hot Spots

PrabHot, a computational method that can effectively identify hot spots on protein-RNA binding interfaces using an ensemble approach.

Usage Notes: The upload PDB file should be a protein-RNA complex (contain at least two chains). The computing time depends on the number of residues of the protein in the complex. Most predictions will be finished in 5-30 minutes. Here is a pre-calculated example to display the prediction results: 1FEU
Please submit a new task after a task is completed. If too many tasks are submitted at the same time, they will be killed.

  • structure search
  • pdb id search

Upload your structure files

files must be in PDB-like format and ended in ".pdb", maximum allowed 2 files uploaded at a time

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Private Key:          Secure code for private access

 

an example of protein structure file

For questions about PrabHot server, please email Lei Deng for assistance.